BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027D04SP1|AL428712
(878 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1708 1687 0.0
>3x_Contig1708
Length = 19451
Score = 1687 bits (849), Expect = 0.0
Identities = 869/878 (98%), Gaps = 1/878 (0%)
Strand = Plus / Plus
Query: 1 tcaatggtgatacgaatgtgggatacatacctctccgagacttctttggagacaagcata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16461 tcaatggtgatacgaatgtgggatacatacctctccgagacttctttggagacaagcata 16520
Query: 61 gtctcagaggatctcatgtctgacgcatcgacttctctggatagaaagtcgagaacatcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16521 gtctcagaggatctcatgtctgacgcatcgacttctctggatagaaagtcgagaacatcg 16580
Query: 121 tcatcagggccctcatcttcagactccagacaaactactctcagtgaatttcatgttttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16581 tcatcagggccctcatcttcagactccagacaaactactctcagtgaatttcatgttttc 16640
Query: 181 gtttgtgcagctttcctagtgaaatggtcagacgaattaatgaagatggacttccaagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16641 gtttgtgcagctttcctagtgaaatggtcagacgaattaatgaagatggacttccaagag 16700
Query: 241 ataattacattctatacaaaatccaccgacaaaatcgtggaaggaatctgatatagaaat 300
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16701 ataattacattct-tacaaaatccaccgacaaaatcgtggaaggaatctgatatagaaat 16759
Query: 301 gttactaagtgaagcttacawatggcagtcgttgtamaaagatgctacttctcattggag 360
|||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct: 16760 gttactaagtgaagcttacatatggcagtcgttgtacaaagatgctacttctcattggag 16819
Query: 361 gtgatctttgaagggagaatactaaaatttaatactttcacatatatctaatatataatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16820 gtgatctttgaagggagaatactaaaatttaatactttcacatatatctaatatataatg 16879
Query: 421 taaactgcctgattcaaamaactgtattgtggagaatgaataactaacagcccacctgca 480
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 16880 taaactgcctgattcaaacaactgtattgtggagaatgaataactaacagcccacctgca 16939
Query: 481 ggttccgtgaatcttctagcatanttctccncgnatatntcttgntttttttctcatcag 540
||||||||||||||||||||||| |||||| || |||| ||||| |||||||||||||||
Sbjct: 16940 ggttccgtgaatcttctagcatacttctcctcgcatatctcttgctttttttctcatcag 16999
Query: 541 tagcatcattattgtttgcagtgtctgaaattattgttagcaaataattaatcaaaactt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17000 tagcatcattattgtttgcagtgtctgaaattattgttagcaaataattaatcaaaactt 17059
Query: 601 aatctcatctcatctcaatgaagttgctggtagataaggtagtctcgactggcggttaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17060 aatctcatctcatctcaatgaagttgctggtagataaggtagtctcgactggcggttaag 17119
Query: 661 gggctattccacgagatatcgacatgtatagagcaaggagtcgtcggaacaacgatggta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17120 gggctattccacgagatatcgacatgtatagagcaaggagtcgtcggaacaacgatggta 17179
Query: 721 gtggcgtaagaggaccaaacagtgctttgacccagtttttaaaggaacaaggtattagtg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17180 gtggcgtaagaggaccaaacagtgctttgacccagtttttaaaggaacaaggtattagtg 17239
Query: 781 ctgagaatattagagatagatggttagaagctcaaaagaaggaagccgaacatccacaag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17240 ctgagaatattagagatagatggttagaagctcaaaagaaggaagccgaacatccacaag 17299
Query: 841 aaactcagaaggatgattctgaaacagaatctgatgaa 878
||||||||||||||||||||||||||||||||||||||
Sbjct: 17300 aaactcagaaggatgattctgaaacagaatctgatgaa 17337
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6460
Number of Sequences: 1807
Number of extensions: 6460
Number of successful extensions: 232
Number of sequences better than 1.0e-20: 1
length of query: 878
length of database: 10,358,551
effective HSP length: 16
effective length of query: 862
effective length of database: 10,329,639
effective search space: 8904148818
effective search space used: 8904148818
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)